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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1227474 chr2:148881451 A/C MMADHC chr2:150426148-150444330:- 0.61 5.96 5.8E-9 Box Plot
BLCA rs12279880 chr11:77666487 A/G INTS4L1 chr7:64601603-64694600:+ -0.51 -7.13 5.0E-12 Box Plot
BLCA rs12280475 chr11:36877543 A/G C11orf46 chr11:30344649-30359978:+ -0.73 -6.29 8.8E-10 Box Plot
BLCA rs12280475 chr11:36877543 A/G EIF3M chr11:32605344-32627808:+ -0.74 -6.98 1.28E-11 Box Plot
BLCA rs12280475 chr11:36877543 A/G NAT10 chr11:34127149-34169217:+ -0.76 -6.22 1.33E-9 Box Plot
BLCA rs12280475 chr11:36877543 A/G PRMT3 chr11:20409076-20530840:+ -0.64 -5.99 4.93E-9 Box Plot
BLCA rs12280735 chr11:114855535 C/T BUD13 chr11:116618886-116643704:- -0.87 -6.45 3.36E-10 Box Plot
BLCA rs12280735 chr11:114855535 C/T RNF214 chr11:117103341-117157161:+ -0.93 -6.43 3.9E-10 Box Plot
BLCA rs12280735 chr11:114855535 C/T TIMM8B chr11:111955524-111957522:- -0.68 -5.99 4.71E-9 Box Plot
BLCA rs12280839 chr11:50199977 C/G MTCH2 chr11:47638867-47664175:- 0.71 6.2 1.49E-9 Box Plot
BLCA rs12280839 chr11:50199977 C/G PSMC3 chr11:47440320-47448024:- 0.5 6.06 3.22E-9 Box Plot
BLCA rs12280839 chr11:50199977 C/G SLC39A13 chr11:47428683-47438052:+ 0.53 7 1.17E-11 Box Plot
BLCA rs12284929 chr11:77659512 T/G INTS4L1 chr7:64601603-64694600:+ 0.5 7.09 6.58E-12 Box Plot
BLCA rs12288260 chr11:93653390 A/G CEP57 chr11:95523129-95565857:+ 0.66 6.53 2.12E-10 Box Plot
BLCA rs12288260 chr11:93653390 A/G EED chr11:85955586-85989855:+ 0.7 6.4 4.55E-10 Box Plot